Hello, I have a good answer for you: Webmin
Open an SSH client such as Putty so you can be in the console, logged in as root.
Enter these commands:
dpkg --install webmin_1.680_all.deb
The install will likely not finish due to missing dependencies. To resolve the dependencies and finish webmin install, type:
apt-get install -f
Once done, you can access Webmin by opening a browser and going to https://x.x.x.x:10000
I have 3 websites running on 1 Ubuntu 12.04 droplet and they each use directives (which you can find inside of Webmin) that are like this:
# Indexes + Directory Root.
DirectoryIndex index.php index.html
# CGI Directory
ScriptAlias /cgi-bin/ /var/www/helpme2000.com/cgi-bin/
CustomLog /var/www/helpme2000.com/logs/access.log combined